A k-mer based algorithm for high-specific oligonucleotide design

KASpOD is a program for designing signature sequences for various applications including in phylogenetic or functional microarray experiments.
If you want to use it and haven't got an account yet, you can register here.

New Feature Available! KASpOD can now design probes longer than 31 nucleotides.

Identification. Please enter your login and password

Feel free to contact us at g2im [dot] kaspod [at] gmail [dot] com if you have questions, bug reports, suggestions, or any ideas regarding KASpOD.

If you find KASpOD or the 16S probe dataset useful for your research, please cite:

Parisot N., Denonfoux J., Dugat-Bony E., Peyret P. and Peyretaillade E. (2012)
KASpOD - A web service for highly specific and explorative oligonucleotide design.
Bioinformatics, 28, 3161–3162. doi:10.1093/bioinformatics/bts597